Unsupervised deep learning framework for data-driven gating in positron emission tomography.
Tiantian Li, Zhaoheng Xie, Wenyuan Qi, Evren Asma, Jinyi Qi
Medical Physics. 2023.
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AI-Based Automated Lipomatous Tumor Segmentation in MR Images: Ensemble Solution to Heterogeneous Data
Liu, CC., Abdelhafez, Y.G., Yap, S.P. et al.
J Digit Imaging. 36, 1049–1059 (2023).
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Interferometric diffusing wave spectroscopy imaging with an electronically variable time-of-flight filter
Zhao M, Zhou W, Aparanji S, Mazumder D, Srinivasan VJ
Optica. 2023 Jan 20;10(1):42-52
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Deep learning-based optical coherence tomography image analysis of human brain cancer
Wang N, Lee CY, Park HC, Nauen DW, Chaichana KL, Quinones-Hinojosa A, Bettegowda C, Li X
Biomedical Optics Express. 2023 Jan 1;14(1):81-8. 
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Intraoperative detection of IDH-mutant glioma using fluorescence lifetime imaging

Silvia Noble Anbunesan, Alba Alfonso-Garcia, Xiangnan Zhou, Julien Bec, Han Sung Lee, Lee-Way Jin, Orin Bloch, Laura Marcu

Journal of Biophotonics. 2023 Apr;16(4):e202200291.  Epub 2022 Dec 23.

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Virtual tissue staining in pathology using machine learning
Pillar N, Ozcan A.
Expert Review of Molecular Diagnostics. 2022 Nov 2.
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Virtual staining of defocused autofluorescence images of unlabeled tissue using deep neural networks
Zhang Y, Huang L, Liu T, Cheng K, de Haan K, Li Y, Bai B, Ozcan A
Intelligent Computing. 2022 Oct 27
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Label-free virtual HER2 immunohistochemical staining of breast tissue using deep learning
Bai B, Wang H, Li Y, de Haan K, Colonnese F, Wan Y, Zuo J, Doan NB, Zhang X, Zhang Y, Li J, Yang X, Dong W, Darrow M, Kamangar E, Lee H, Rivenson Y, Ozcan A.
BME Frontiers. 2022 Oct 26; 2022
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Interferometric diffuse optics: recent advances and future outlook
Zhou W, Zhao M, Srinivasan VJ
Neurophotonics. 2022 Oct 22;10(1):013502
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FoVolNet: Fast Volume Rendering using Foveated Deep Neural Networks
Bauer D, Wu Q, Ma KL
IEEE Transactions on Visualization and Computer Graphics. 2022 Sep 26;29(1):515-25
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Optical imaging and spectroscopy for the study of the human brain: status report
Ayaz H, Baker WB, Blaney G, Boas DA, Bortfeld H, Brady K, Brake J, Brigadoi S, Buckley EM, Carp SA, Cooper RJ, Cowdrick KR, Culver JP, Dan I, et al
Neurophotonics. 2022 Aug;9(S2):S24001
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Virtual stain transfer in histology via cascaded deep neural networks
Yang X, Bai B, Zhang Y, Li Y, de Haan K, Liu T, Ozcan A
ACS Photonics. 2022 Aug 17;9(9):3134-43
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Dual-modality fluorescence lifetime imaging-optical coherence tomography intravascular catheter system with freeform catheter optics
Li C, Bec J, Zhou X, Marcu L.
Journal of Biomedical Optics. 2022 Jul;27(7):076005
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Engineering the gain and bandwidth in avalanche photodetectors
Bartolo-Perez C, Ahamed A, Mayet AS, Rawat A, McPhillips L, Ghandiparsi S, Bec J, Ariño-Estrada G, Cherry S, Wang SY, Marcu L, Islam S
Optics Express. 2022 May 9;30(10):16873-82 
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Intraoperative delineation of p16+ oropharyngeal carcinoma of unknown primary origin with fluorescence lifetime imaging: Preliminary report
Weyers BW, Birkeland AC, Marsden MA, Tam A, Bec J, Frusciante RP, Gui D, Bewley AF, Abouyared M, Marcu L, Farwell DG
Head & Neck. 2022 May 5
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Assessment of Murine Colon Inflammation Using Intraluminal Fluorescence Lifetime Imaging
Alfonso-Garcia A, Cevallos SA, Lee JY, Li C, Bec J, Bäumler AJ, Marcu L
Molecules. 2022 Feb 15;27(4):1317
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First in patient assessment of brain tumor infiltrative margins using simultaneous time-resolved measurements of 5-ALA-induced PpIX fluorescence and tissue autofluorescence
Alfonso-García A, Zhou X, Bec J, Anbunesan SN, Fereidouni F, Jin LW, Lee HS, Bloch O, Marcu L
Journal of biomedical optics. 2022 Feb;27(2):020501
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Scanning interferometric near-infrared spectroscopy
Kholiqov O, Zhou W, Zhang T, Zhao M, Ghandiparsi S, Srinivasan VJ
Optics Letters. 2021 Sep 15;46(18):4498-501
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